An Introduction to Data Visualization in R using ggplot
This semester the Biomathematics GSA will be hosting student led tutorials on a variety of topics. The goal of these tutorials is to help graduate students develop computational tools. This…
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Biomathematics Seminar
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- Biomathematics Seminar
Introduction to R Shiny: presenting results with an interactive web application
This semester the Biomathematics GSA will be hosting student led tutorials on a variety of topics. The goal of these tutorials is to help graduate students develop computational tools. This…
Jacek Brodzki, Centre for Geometry, Topology, and Applications, Southampton, Persistence in action: quantifying the topology of lungs
Cox 306Topology is dedicated to the study of shapes, and its starting point is an easy-sounding question: How can I tell if two objects are similar? While humans are very adept…
Renee Brady, NC State, Forecasting Cancer: Predicting Individual Responses to Intermittent Androgen Deprivation Therapy in Prostate Cancer
Cox 306Intermittent androgen deprivation therapy (IADT) is an attractive treatment approach for biochemically recurrent prostate cancer (PCa), whereby cycling treatment on and off has been shown to limit toxicities and reduce…
Sarah Olson, Worcester Polytechnic Institute, Modeling the dynamics of centrosome movement
Cox 306The mitotic spindle is a complex, dynamic machine important for cell division. The spindle is composed of a network of microtubules and motor proteins that generate forces to form a…
Rayanne Luke, University of Delaware, Parameter Identification for Tear Film Thinning and Breakup
ZoomMillions of Americans experience dry eye syndrome, a condition that decreases quality of vision and causes ocular discomfort. A phenomenon associated with dry eye syndrome is tear film breakup (TBU),…
Mihaela Paun, University of Glasgow, Assessing model mismatch and model selection in a Bayesian uncertainty quantification analysis of a fluid-dynamics model of pulmonary blood circulation
ZoomIn this talk I will present a Bayesian approach to quantify the uncertainty of model parameters and hemodynamic predictions in a one-dimensional fluid-dynamics model of the pulmonary system by integrating…
Biomath Seminar: Justen Geddes, NC State, Modeling and Data Analysis of Postural Orthostatic Tachycardia Syndrome
Cox 306Postural Orthostatic Tachycardia Syndrome (POTS) is characterized by an increase of heart rate of 30 beats per minute (40 bpm in patients aged 12-19 years) upon a postural change, combined…
Biomath Seminar: Zixuan Cang, NC State, Spatiotemporal analysis of single-cell and spatial genomics data
Cox 306The emerging single-cell and spatial genomics techniques allow us to elucidate the governing rules of multicellular systems with unprecedented resolution and depth. These datasets are often high-dimensional, complex, and heterogeneous.…
Biomath Seminar: Dr. Archana Timsina and Evan Curcio, NC State, Identifiability and optimal control analysis of HIV infection and opioid addiction model / How do tension ratios determine morphometry in physical models of notochord cell packing?
Cox 306Dr. Timsina's Talk: Identifiability and optimal control analysis of HIV infection and opioid addiction model. Abstract: In a compartmental model of HIV infection and opioid addiction, dynamics such as equilibria, basic reproduction…
Biomathematics Seminar: Didong Li, UNC Chapel Hill, Inference for Gaussian processes on compact Riemannian manifolds
Cox 306Gaussian processes (GPs) are widely employed as versatile modeling and predictive tools in spatial statistics, functional data analysis, computer modeling and diverse applications of machine learning. They have been widely…
Biomathematics Seminar: Gerardo Chowell-Puente, Enhancing epidemic forecasts using multi- scale models: Application to COVID-19 and monkeypox epidemics
ZoomZoom Meeting: https://ncsu.zoom.us/j/93046132033?pwd=dkZiTjlKazgzK2Q3aXJra1g2R1Q0dz09 Meeting ID: 930 4613 2033 Passcode: 075251
Biomathematics Seminar: Renee Brady-Nicholls, NC State Alum, Leveraging Patient-Reported Outcome Dynamics to Predict Treatment Response
ZoomZoom Meeting: https://ncsu.zoom.us/j/93046132033?pwd=dkZiTjlKazgzK2Q3aXJra1g2R1Q0dz09 Meeting ID: 930 4613 2033 Passcode: 075251
Biomathematics Seminar: Xingcheng Lin, Genome Organization from the Ground Up – Deciphering Molecular Mechanisms for Chromatin Organization
Cox 306Chromatin structure tightly regulates gene expression and epigenetic processes. The nuclear environment is complex, featuring tension exerted by force-generating proteins and molecular crowding modulated by different ionic concentrations. Understanding the…
Biomathematics Seminar: Benjamin Randall, NC State Alum, Physiology-informed machine learning: a biologically constrained, data-driven approach to cardiovascular health
ZoomZoom Meeting: https://ncsu.zoom.us/j/93046132033?pwd=dkZiTjlKazgzK2Q3aXJra1g2R1Q0dz09 Meeting ID: 930 4613 2033 Passcode: 075251
Biomathematics Seminar: Yutong Sha, University of California Irvine, Reconstructing transition dynamics from static single-cell genomic data
Cox 306Recently, single-cell transcriptomics has provided a powerful approach to investigate cellular properties in unprecedented resolution. However, given a small number of temporal snapshots of single-cell transcriptomics, how to connect them…
Biomathematics Seminar: Carrie Manore, An Integrated Approach to Modeling Climate-Driven Pathogen Spread
ZoomZoom Meeting: https://ncsu.zoom.us/j/93046132033?pwd=dkZiTjlKazgzK2Q3aXJra1g2R1Q0dz09 Meeting ID: 930 4613 2033 Passcode: 075251